Leveraging Terminology Services for FAIR Semantic Data Integration Across NFDI Domains

How to Integrate Terminology Services Into Other Service Applications

Authors

DOI:

https://doi.org/10.52825/cordi.v1i.356

Keywords:

Terminology Services, FAIR metadata

Abstract

The National Research Data Infrastructure (NFDI) strives to develop FAIR research data and data services for major scientific disciplines, using terminologies as a key factor for semantic annotations and semantic interoperability of data. Several NFDI consortia provide domain-specific terminologies through Terminology services or registries, offering access, search capabilities, visualization, and downloads. Prioritizing user-friendly access, terminology services seamlessly integrate semantic concepts into applications, often operating in the background to enable smooth semantic annotation and data interoperability. We present exemplary fields of application from selected disciplines and how terminology services support semantic search, user experience, annotation workflows, terminology curation and design.

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References

SwateOntology DB / Swobup, https://nfdi4plants.org/content/service.html (last accessed 25 April 2023)

GFBio Terminology Service, https://terminologies.gfbio.org/ (last accessed 25 April 2023)

NFDI4Chem Terminology Service, https://terminology.nfdi4chem.de (last accessed 25 April 2023)

GEMET - GEneral Multilingual Environmental Thesaurus, https://www.eionet.europa.eu/gemet/ (last accessed 25 April 2023)

SemLookP, https://semanticlookup.zbmed.de/ (last accessed 25 April 2023)

NFDI4Ing Terminology Service, https://terminology.nfdi4ing.de/ts/ (last accessed 25 April 2023)

DANTE, https://api.dante.gbv.de/ (last accessed 25 April 2023)

S. Jupp, T. Burdett, C. Leroy, and H. Parkinson, "A new Ontology Lookup Service at EMBL-EBI", presented at the Workshop on Semantic Web Applications and Tools for Life Sciences, 2015. Accessed: Apr. 25, 2023. [Online]. Available: https://www.semanticscholar.org/paper/A-new-Ontology-Lookup-Service-at-EMBL-EBI-Jupp-Burdett/b83bfbfc1f2f08e5b88af5ef65ef2a8687ac4112

P. Strömert, J. Hunold, A. Castro, S. Neumann, and O. Koepler, “Ontologies4Chem: the landscape of ontologies in chemistry,” Pure Appl. Chem., Mar. 2022, doi: https://doi.org/10.1515/pac-2021-2007.

P. Strömert, J. Hunold, and O. Koepler, “1st Ontologies4Chem Workshop – Ontologies for chemistry,” Sep. 07, 2022, doi: https://doi.org/10.25798/frnp-sn04.

L. Langnickel, R. Baum, J. Darms, S. Madan, and J. Fluck “COVID-19 preVIEW: Semantic Search to Explore COVID-19 Research Preprints,” Public Health and Informatics, vol.281, pp. 78-82, May, 2021, doi: https://doi.org/10.3233/SHTI210124

L. Langnickel, J. Darms, R. Baum, and J. Fluck “preVIEW: from a fast prototype towards a sustainable semantic search system for central access to COVID-19 preprints,” EAHIL, vol.17, no.3, pp. 8-14, Sep., 2021, doi: https://doi.org/10.32384/jeahil17484

N. Karam, C. Müller-Birn, M. Gleisberg et al., "A Terminology Service Supporting Semantic Annotation, Integration, Discovery and Analysis of Interdisciplinary Research Data," Datenbank Spektrum 16, pp 195–205, Oct. 05, 2016, doi: https://doi.org/10.1007/s13222-016-0231-8

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Published

2023-09-07

How to Cite

Baum, R., & Koepler, O. (2023). Leveraging Terminology Services for FAIR Semantic Data Integration Across NFDI Domains: How to Integrate Terminology Services Into Other Service Applications. Proceedings of the Conference on Research Data Infrastructure , 1. https://doi.org/10.52825/cordi.v1i.356
Received 2023-04-25
Accepted 2023-06-29
Published 2023-09-07

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